Photo of Dr Richard Gregory

Dr Richard Gregory Ph.D.

Senior Research Associate Biochemistry & Systems Biology

Publications

2013

Parallel Recruitment of Multiple Genes into C-4 Photosynthesis (Journal article)

Christin, P. -A., Boxall, S. F., Gregory, R., Edwards, E. J., Hartwell, J., & Osborne, C. P. (2013). Parallel Recruitment of Multiple Genes into C-4 Photosynthesis. GENOME BIOLOGY AND EVOLUTION, 5(11), 2174-2187. doi:10.1093/gbe/evt168

DOI: 10.1093/gbe/evt168

2012

Adaptive Evolution of C-4 Photosynthesis through Recurrent Lateral Gene Transfer (Journal article)

Christin, P. -A., Edwards, E. J., Besnard, G., Boxall, S. F., Gregory, R., Kellogg, E. A., . . . Osborne, C. P. (2012). Adaptive Evolution of C-4 Photosynthesis through Recurrent Lateral Gene Transfer. CURRENT BIOLOGY, 22(5), 445-449. doi:10.1016/j.cub.2012.01.054

DOI: 10.1016/j.cub.2012.01.054

2011

A De Novo Expression Profiling of Anopheles funestus, Malaria Vector in Africa, Using 454 Pyrosequencing (Journal article)

Gregory, R., Darby, A. C., Irving, H., Coulibaly, M. B., Hughes, M., Koekemoer, L. L., . . . Wondji, C. S. (2011). A De Novo Expression Profiling of Anopheles funestus, Malaria Vector in Africa, Using 454 Pyrosequencing. PLOS ONE, 6(2). doi:10.1371/journal.pone.0017418

DOI: 10.1371/journal.pone.0017418

2010

Rule-based simulation of temperate bacteriophage infection: Restriction–modification as a limiter to infection in bacterial populations (Journal article)

Gregory, R., Saunders, V. A., & Saunders, J. R. (2010). Rule-based simulation of temperate bacteriophage infection: Restriction–modification as a limiter to infection in bacterial populations. Biosystems, 100(3), 166-177. doi:10.1016/j.biosystems.2010.02.010

DOI: 10.1016/j.biosystems.2010.02.010

2008

Individual-based modelling of genetic elements and evolution in bacteria. (Chapter)

Saunders, V. A., Gregory, R., & Saunders, J. R. (2008). Individual-based modelling of genetic elements and evolution in bacteria.. In M. Khosrow-Pour (Ed.), Encyclopedia of Information Science and Technology, (pp. 716-724). Hershey, Pennsylvania: IGI Global.

Rule-based computing system for microbial interactions and communications: Evolution in virtual bacterial populations (Journal article)

Gregory, R., Saunders, V. A., & Saunders, J. R. (2008). Rule-based computing system for microbial interactions and communications: Evolution in virtual bacterial populations. Biosystems, 91(1), 216-230. doi:10.1016/j.biosystems.2007.09.002

DOI: 10.1016/j.biosystems.2007.09.002

Rule-based modelling of conjugative plasmid transfer and incompatibility (Journal article)

Gregory, R., Saunders, J. R., & Saunders, V. A. (2008). Rule-based modelling of conjugative plasmid transfer and incompatibility. Biosystems, 91(1), 201-215. doi:10.1016/j.biosystems.2007.09.003

DOI: 10.1016/j.biosystems.2007.09.003

2006

The Paton individual-based model legacy (Journal article)

Gregory, R., Saunders, J. R., & Saunders, V. A. (2006). The Paton individual-based model legacy. Biosystems, 85(1), 46-54. doi:10.1016/j.biosystems.2006.02.009

DOI: 10.1016/j.biosystems.2006.02.009

2005

Computing Bacterial Evolvability using Individual-based Models (Chapter)

Paton, R. C., Gregory, R., Vlachos, C., Palmer, J. W., Saunders, J. R., & Wu, Q. H. (2005). Computing Bacterial Evolvability using Individual-based Models. In M. Gheorghe (Ed.), Molecular computation models : unconventional approaches (pp. 51-61). Hershey PA: Idea Group Publishers.

2004

Evolvable Social Agents for Bacterial Systems Modeling (Journal article)

Paton, R., Gregory, R., Vlachos, C., Saunders, J., & Wu, H. (2004). Evolvable Social Agents for Bacterial Systems Modeling. IEEE Transactions on Nanobioscience, 3(3), 208-216. doi:10.1109/tnb.2004.833701

DOI: 10.1109/tnb.2004.833701

A Model of Bacterial Adaptability Based on Multiple Scales of Interaction : COSMIC (Chapter)

Gregory, R., Paton, P. R., Saunders, J. R., & Wu, Q. H. (2004). A Model of Bacterial Adaptability Based on Multiple Scales of Interaction : COSMIC. In R. Paton, H. Bolouri, M. Holcombe, J. H. Parish, & R. Tateson (Eds.), Computation in Cells and Tissues (pp. 340). Berlin: Springer.