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Real-Time Subsampled Analysis and Recovery for High-Resolution 3D Tomography

Funding
Funded
Study mode
Full-time
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Subject area
Computer Science
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Overview

This project is aligned with the prestigious EPSRC Centre for Doctoral Training in Distributed Algorithms, offering advanced, cohort-based training in next-generation data science.

About this opportunity

Based at the University of Liverpool, the successful candidate will gain hands-on experience with cutting-edge supercomputing facilities and work within the Signal Processing Group, collaborating with experts across areas such as Bayesian methods, machine learning, image and radar processing, data fusion, and energy-efficient computing.

 

Key highlights include:

  • Cutting-edge research in 3D compressive imaging
  • Industry collaboration with real-world data and supervision
  • Access to GPU and supercomputing resources
  • CDT training and cohort-based support
  • Focused on solving high-impact, interdisciplinary problems
  • Developing novel algorithms in a growing, relevant field

3D Imaging, commonly referred to as tomography, is used in many state-of-the-art imaging and characterisation methods, critical to both the medical and engineering sciences.  There are several mechanisms used to obtain experimental data, that range from imaging multiple identical structures naturally oriented in different directions, to tilting either the object or illumination and acquiring images of the same structure from multiple different directions.

In all cases, the quality of the final 3D reconstruction is determined by the total number of different projections and the signal to noise of each individual image. This requirement creates numerous experimental challenges; it takes time to acquire each projection, and to achieve high signal/noise each projection requires a high flux of potentially damaging radiation (X-rays, electron, protons, light etc).

Recently SenseAI has developed a suite of 2D and hyperspectral imaging tools that use compressive sensing and sparse-coding based methods to reduce image acquisition time and inpaint missing information (www.youtube.com/@SenseAI_Innovations).

Expanding the current 2D methodology into 3D imaging at a speed, resolution and sensitivity that can lead to practical applications will require several innovative approaches to be developed. For example, new considerations arise when determining the form and shape of the data sub regions used for patch-based inpainting methods. While there are often cases where each axis may be treated identically (such as 3D imaging where the third axis represents an additional spatial dimension), this assumption is not universally valid. In the case of rotational volumetric imaging, where the third dimension represents a given angle, adjacent voxels along the 3rd axis no longer represent a linear translation in real-space, and thus, previous assumptions made about similar 2-dimensional data do not hold, requiring the development of a novel sensing model. Additionally, while the current (GPU parallelised) implementation for 2D signals relies on the vectorisation of each sub region, previous research has shown that for larger 3D volumes, tensor-based dictionary learning, such the representation of each signal as a sparse sum of Kruskal decompositions, can lead to an improvement in both signal recovery and time-to-solution.

The goal of this PhD is therefore to evaluate the different approaches to sparse sampling, signal modelling and recovery in 3 dimensions to develop a practical methodology that will

allow optimised real-time subsampled analysis of 3D signals for a range of imaging applications.

Each project aligned with the CDT is conducted in collaboration with an industrial partner, who will provide co-supervision and offer students unique access to state-of-the-art computing platforms. Students will have the opportunity to work on real-world problems, benchmarking, and industry-relevant data. Our graduates gain invaluable experience working across academic disciplines on high-demand topics, addressing key industry needs.

The successful student will be based at the University of Liverpool and be aligned to the CDT and Signal Processing Group .

This studentship is open to British and EU nationals.

Who is this opportunity for?

The ideal candidate will hold an undergraduate or master’s degree in a numerate subject, with a keen interest in next-generation data science, computing, and collaborating with industry partners to solve real-world challenges.

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How to apply

  1. 1. Contact supervisors

    Prof. Nigel Browning Nigel.Browning@liverpool.ac.uk Professor Nigel Browning – Albert Crewe Centre for Electron Microscopy – University of Liverpool

    Please visit our website for further application guidance using the following link:

    https://www.liverpool.ac.uk/distributed-algorithms-cdt/apply/

    Important Notes for Applicants:

    • Do not submit a research proposal, as the PhD project is already defined.
    • Instead, you must provide a supporting statement (maximum 700 words) explaining:
      • Why you are interested in pursuing a PhD
      • Why this specific project appeals to you
      • Why you want to join this research group

    If you have any questions about the project, please contact Prof. Nigel Browning: Nigel.Browning@liverpool.ac.uk

  2. 2. Prepare your application documents

    You may need the following documents to complete your online application:

    • A research proposal (this should cover the research you’d like to undertake)
    • University transcripts and degree certificates to date
    • Passport details (international applicants only)
    • English language certificates (international applicants only)
    • A personal statement
    • A curriculum vitae (CV)
    • Contact details for two proposed supervisors
    • Names and contact details of two referees.
  3. 3. Apply

    Finally, register and apply online. You'll receive an email acknowledgment once you've submitted your application. We'll be in touch with further details about what happens next.

    Applications may close early if a suitable candidate is found before the listed deadline.

    Please visit our website for full guidance on how to apply. You must register and apply online. You’ll receive an email acknowledgment once you’ve submitted your application. We’ll be in touch with further details about what happens next.

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Funding your PhD

This is a 4-year fully funded PhD studentship available to UK and eligible European candidates, with flexible start dates available until 1 October 2025.

The successful student will receive funding for the UK tuition fees and a monthly maintenance grant of UKRI Doctoral Stipend rate (£19,237 per annum, increasing to £20,780 from October 2025). In addition to fees and stipend, the student will receive a training grant of £4.5k/year for research-related expenses such as training and conferences.

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Contact us

Have a question about this research opportunity or studying a PhD with us? Please get in touch with us, using the contact details below, and we’ll be happy to assist you.

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