Dr Luca Lenzi

Biochemistry & Systems Biology

Publications

2021

Phage gene expression and host responses lead to infection-dependent costs of CRISPR immunity (Journal article)

Meaden, S., Capria, L., Alseth, E., Gandon, S., Biswas, A., Lenzi, L., . . . Westra, E. R. (2021). Phage gene expression and host responses lead to infection-dependent costs of CRISPR immunity. ISME JOURNAL, 15(2), 534-544. doi:10.1038/s41396-020-00794-w

DOI: 10.1038/s41396-020-00794-w

2019

DNA extraction and amplicon production strategies deeply influence the outcome of gut mycobiome studies (Journal article)

Frau, A., Kenny, J. G., Lenzi, L., Campbell, B. J., Ijaz, U. Z., Duckworth, C. A., . . . Probert, C. S. J. (2019). DNA extraction and amplicon production strategies deeply influence the outcome of gut mycobiome studies. SCIENTIFIC REPORTS, 9. doi:10.1038/s41598-019-44974-x

DOI: 10.1038/s41598-019-44974-x

Application of long read sequencing to determine expressed antigen diversity in Trypanosoma brucei infections (Journal article)

Jayaraman, S., Harris, C., Paxton, E., Donachie, A. -M., Vaikkinen, H., McCulloch, R., . . . Morrison, L. (2019). Application of long read sequencing to determine expressed antigen diversity in Trypanosoma brucei infections. PLoS Neglected Tropical Diseases. doi:10.1371/journal.pntd.0007262

DOI: 10.1371/journal.pntd.0007262

2018

16S rRNA amplicon sequencing reveals a polymicrobial nature of complicated claw horn disruption lesions and interdigital phlegmon in dairy cattle (Journal article)

Bay, V., Griffiths, B., Carter, S., Evans, N. J., Lenzi, L., Bicalho, R., & Oikonomou, G. (2018). 16S rRNA amplicon sequencing reveals a polymicrobial nature of complicated claw horn disruption lesions and interdigital phlegmon in dairy cattle. Scientific Reports, 8. doi:10.1038/s41598-018-33993-9

DOI: 10.1038/s41598-018-33993-9

Temperature Driven Changes in Benthic Bacterial Diversity Influences Biogeochemical Cycling in Coastal Sediments (Journal article)

Hicks, N., Liu, X., Gregory, R., Kenny, J., Lucaci, A., Lenzi, L., . . . Duncan, K. R. (2018). Temperature Driven Changes in Benthic Bacterial Diversity Influences Biogeochemical Cycling in Coastal Sediments. FRONTIERS IN MICROBIOLOGY, 9. doi:10.3389/fmicb.2018.01730

DOI: 10.3389/fmicb.2018.01730

2017

Comparison Of The Human Gastric Microbiota In Hypochlorhydric States Arising As A Result Of Helicobacter pylori-Induced Atrophic Gastritis, Autoimmune Atrophic Gastritis And Proton Pump Inhibitor Use (Journal article)

parsons, B. N., Ijaz, U. Z., D'Amore, R., Burkitt, M. D., Eccles, R., Lenzi, L., . . . Pritchard, D. M. (2017). Comparison Of The Human Gastric Microbiota In Hypochlorhydric States Arising As A Result Of Helicobacter pylori-Induced Atrophic Gastritis, Autoimmune Atrophic Gastritis And Proton Pump Inhibitor Use. PLoS Pathogens. doi:10.1101/144907

DOI: 10.1101/144907

Comparison of the human gastric microbiota in hypochlorhydric states arising as a result of Helicobacter pylori-induced atrophic gastritis, autoimmune atrophic gastritis and proton pump inhibitor use (Journal article)

Parsons, B. N., Ijaz, U. Z., D'Amore, R., Burkitt, M. D., Eccles, R., Lenzi, L., . . . Pritchard, D. M. (2017). Comparison of the human gastric microbiota in hypochlorhydric states arising as a result of Helicobacter pylori-induced atrophic gastritis, autoimmune atrophic gastritis and proton pump inhibitor use. PLoS Pathogens, 13(11). doi:10.1371/journal.ppat.1006653

DOI: 10.1371/journal.ppat.1006653

2016

Local adaptation of a bacterium is as important as its presence in structuring a natural microbial community (Journal article)

Gomez, P., Paterson, S., De Meester, L., Liu, X., Lenzi, L., Sharma, M. D., . . . Buckling, A. (2016). Local adaptation of a bacterium is as important as its presence in structuring a natural microbial community. Nature Communications, 7. doi:10.1038/ncomms12453

DOI: 10.1038/ncomms12453

2015

The Gut Microbiota of Wild Mice (Journal article)

Weldon, L., Abolins, S., Lenzi, L., Bourne, C., Riley, E. M., & Viney, M. (2015). The Gut Microbiota of Wild Mice. PLOS ONE, 10(8). doi:10.1371/journal.pone.0134643

DOI: 10.1371/journal.pone.0134643

ePS06.1 Stenotrophomonas maltophilia is increased in patients with cystic fibrosis-related diabetes and displays enhanced growth under physiologically-relevant levels of glucose (Journal article)

Fothergill, J. L., Dyce, P., Jones, G. H., Hickey, G., D'Amore, L., Lenzi, L., . . . Walshaw, M. J. (2015). ePS06.1 Stenotrophomonas maltophilia is increased in patients with cystic fibrosis-related diabetes and displays enhanced growth under physiologically-relevant levels of glucose. Journal of Cystic Fibrosis, 14, S53. doi:10.1016/s1569-1993(15)30169-7

DOI: 10.1016/s1569-1993(15)30169-7

Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes (vol 5, 3979, 2014) (Journal article)

Ilott, N. E., Heward, J. A., Roux, B., Tsitsiou, E., Fenwick, P. S., Lenzi, L., . . . Lindsay, M. A. (2015). Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes (vol 5, 3979, 2014). NATURE COMMUNICATIONS, 6. doi:10.1038/ncomms7814

DOI: 10.1038/ncomms7814

2014

Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes (Journal article)

Ilott, N. E., Heward,, J. A., Roux,, B., Tsitsiou,, E., Fenwick,, P. S., Lenzi,, L., . . . Lindsay,, M. A. (2014). Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes. Nature Communications, 5. doi:10.1038/ncomms4979

DOI: 10.1038/ncomms4979

2012

From a single whole exome read to notions of clinical screening: primary ciliary dyskinesia and RSPH9 p.Lys268del in the Arabian Peninsula (Journal article)

Al Saadi, M. M., Gaunt, T. R., Boustred, C. R., Guthrie, P. A., Liu, X., Lenzi, L., . . . Day, I. N. M. (2012). From a single whole exome read to notions of clinical screening: primary ciliary dyskinesia and RSPH9 p.Lys268del in the Arabian Peninsula. Annals of Human Genetics, 76(3), 211-220.