Overview
This project aims to investigate the effect of post-translational modifications (PTMs) – particularly glycosylation on protein structure, function, and stability. Eukaryotic and prokaryotic proteins often undergo chemical changes after synthesis, known as PTMs, which include functional group additions that significantly influence their activity, stability, localization, and interactions within cellular processes.
About this opportunity
Project Focus: This study examines glycosylation which is a key post-translational modification and its impact on enzyme stability and activity. We will investigate two industrially relevant classes: glycosyl hydrolases and metalloproteases. Emphasis will be on glycosylation patterns to identify strategies that enhance structural integrity, protease resistance, and performance in home-care formulations.
Glycosylation is one of the most critical PTMs, involving the attachment of sugar moieties (glycans) to proteins. The two most common types are:
- N-linked glycosylation: Glycans are attached to the nitrogen atom of asparagine residues.
- O-linked glycosylation: Glycans are attached to the oxygen atom of serine or threonine residues.
Industrial Relevance: Enzymes are widely used across industries from pulp and paper to biofuels. In home-care applications, enzymes play a key role in sustainable cleaning, reducing reliance on fossil fuels and lowering the carbon footprint. However, many wild-type enzymes are unstable in home-care formulations due to surfactants and other cleaning ingredients like proteases, significantly lowering enzyme efficacy; therefore, methods to enhance stability are pertinent.
Hypotheses:
- Glycosylation enhances structural and proteolytic stability of enzymes.
- The type, size, and extent of glycosylation significantly influence enzyme activity and stability.
- Specific glycosylation patterns can optimize both stability and activity.
Methodology: To test these hypotheses, we will use glycoproteomics, biochemical assays, structural bioinformatics, and enzyme activity measurements.