Publications
Selected publications
- An Improved Abstract GPU Model with Data Transfer (Conference Paper - 2017)
- Semiglobal Sequence Alignment with Gaps Using GPU (Journal article - 2020)
2020
Semiglobal Sequence Alignment with Gaps Using GPU
Carroll, T. C., Ojiaku, J. -T., & Wong, P. W. H. (2020). Semiglobal Sequence Alignment with Gaps Using GPU. IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 17(6), 2086-2097. doi:10.1109/TCBB.2019.2914105
Graphics Processing Units: Abstract Modelling and Applications in Bioinformatics
Carroll, T. (2020, June 4). Graphics Processing Units: Abstract Modelling and Applications in Bioinformatics.
2017
An Improved Abstract GPU Model with Data Transfer
Wong, P. W., & Carroll, T. (2017). An Improved Abstract GPU Model with Data Transfer. In Workshop on Heterogeneous and Unconventional Cluster Architectures and Applications (HUCAA). doi:10.1109/ICPPW.2017.28
2015
Pairwise Sequence Alignment with Gaps with GPU
Carroll, T. C., Ojiaku, J. -T., & Wong, P. W. H. (2015). Pairwise Sequence Alignment with Gaps with GPU. In 2015 IEEE INTERNATIONAL CONFERENCE ON CLUSTER COMPUTING - CLUSTER 2015 (pp. 603-610). doi:10.1109/CLUSTER.2015.109