Photo of Prof Christiane Hertz-Fowler

Prof Christiane Hertz-Fowler

Interim Head of Institute of Integrative Biology, Chair in Pathogen Genomics Functional and Comparative Genomics

    Publications

    2018

    Application of long read sequencing to determine expressed antigen diversity in Trypanosoma brucei infections (Journal article)

    Jayaraman, S., Harris, C., Paxton, E., Donachie, A. -M., Vaikkinen, H., McCulloch, R., . . . Morrison, L. (2018). Application of long read sequencing to determine expressed antigen diversity in Trypanosoma brucei infections. doi:10.1101/432245

    DOI: 10.1101/432245

    FungiDB: An Integrated Bioinformatic Resource for Fungi and Oomycetes. (Journal article)

    Basenko, E. Y., Pulman, J. A., Shanmugasundram, A., Harb, O. S., Crouch, K., Starns, D., . . . Hertz-Fowler, C. (2018). FungiDB: An Integrated Bioinformatic Resource for Fungi and Oomycetes.. Journal of fungi (Basel, Switzerland), 4(1). doi:10.3390/jof4010039

    DOI: 10.3390/jof4010039

    No evidence for association between APOL1 kidney disease risk alleles and Human African Trypanosomiasis in two Ugandan populations (Journal article)

    Kimuda, M. P., Noyes, H., Mulindwa, J., Enyaru, J., Alibu, V. P., Sidibe, I., . . . H3, T. R. G. M. (2018). No evidence for association between APOL1 kidney disease risk alleles and Human African Trypanosomiasis in two Ugandan populations. PLOS NEGLECTED TROPICAL DISEASES, 12(2). doi:10.1371/journal.pntd.0006300

    DOI: 10.1371/journal.pntd.0006300

    The Structure of a Conserved Telomeric Region Associated with Variant Antigen Loci in the Blood Parasite Trypanosoma congolense (Journal article)

    Abbas, A. H., Pereira, S. S., D'Archivio, S., Wickstead, B., Morrison, L. J., Hall, N., . . . Jackson, A. P. (2018). The Structure of a Conserved Telomeric Region Associated with Variant Antigen Loci in the Blood Parasite Trypanosoma congolense. GENOME BIOLOGY AND EVOLUTION, 10(9), 2458-2473. doi:10.1093/gbe/evy186

    DOI: 10.1093/gbe/evy186

    2017

    A polymorphism in the haptoglobin, haptoglobin related protein locus is associated with risk of human sleeping sickness within Cameroonian populations (Journal article)

    Ofon, E., Noyes, H., Mulindwa, J., Ilboudo, H., Simuunza, M., Eboo, V., . . . Consortium, H. (2017). A polymorphism in the haptoglobin, haptoglobin related protein locus is associated with risk of human sleeping sickness within Cameroonian populations. PLOS NEGLECTED TROPICAL DISEASES, 11(10). doi:10.1371/journal.pntd.0005979

    DOI: 10.1371/journal.pntd.0005979

    Candidate gene polymorphisms study between human African trypanosomiasis clinical phenotypes in Guinea (Journal article)

    Kabore, J. W., Ilboudo, H., Noyes, H., Camara, O., Kabore, J., Camara, M., . . . Grp, T. R. (2017). Candidate gene polymorphisms study between human African trypanosomiasis clinical phenotypes in Guinea. PLOS NEGLECTED TROPICAL DISEASES, 11(8). doi:10.1371/journal.pntd.0005833

    DOI: 10.1371/journal.pntd.0005833

    Candidate genes-based investigation of susceptibility to Human African Trypanosomiasis in Cote d'Ivoire (Journal article)

    Ahouty, B., Koffi, M., Ilboudo, H., Simo, G., Matovu, E., Mulindwa, J., . . . H3Africa, T. R. G. (2017). Candidate genes-based investigation of susceptibility to Human African Trypanosomiasis in Cote d'Ivoire. PLOS NEGLECTED TROPICAL DISEASES, 11(10). doi:10.1371/journal.pntd.0005992

    DOI: 10.1371/journal.pntd.0005992

    Candidate genes-based investigation of susceptibility to Human African Trypanosomiasis in Côte d'Ivoire (Journal article)

    Ahouty, B., Koffi, M., Ilboudo, H., Simo, G., Matovu, E., Mulindwa, J., . . . H3Africa Consortium. (2017). Candidate genes-based investigation of susceptibility to Human African Trypanosomiasis in Côte d'Ivoire. doi:10.1101/186718

    DOI: 10.1101/186718

    Evidence of population specific selection inferred from 289 genome sequences of Nilo-Saharan and Niger-Congo linguistic groups in Africa (Journal article)

    Mulindwa, J., Noyes, H., Ilboudo, H., Nyangiri, O., Koffi, M., Mumba, D., . . . The H3Africa Consortium. (2017). Evidence of population specific selection inferred from 289 genome sequences of Nilo-Saharan and Niger-Congo linguistic groups in Africa. doi:10.1101/186700

    DOI: 10.1101/186700

    Introducing the TrypanoGEN biobank: A valuable resource for the elimination of human African trypanosomiasis (Journal article)

    Ilboudo, H., Noyes, H., Mulindwa, J., Kimuda, M. P., Koffi, M., Kabore, J. W., . . . Consortium, H. (2017). Introducing the TrypanoGEN biobank: A valuable resource for the elimination of human African trypanosomiasis. PLOS NEGLECTED TROPICAL DISEASES, 11(6). doi:10.1371/journal.pntd.0005438

    DOI: 10.1371/journal.pntd.0005438

    Leaf LIMS: A Flexible Laboratory Information Management System with a Synthetic Biology Focus (Journal article)

    Craig, T., Holland, R., D'Amore, R., Johnson, J. R., McCue, H. V., West, A., . . . Caddick, M. (2017). Leaf LIMS: A Flexible Laboratory Information Management System with a Synthetic Biology Focus. ACS SYNTHETIC BIOLOGY, 6(12), 2273-2280. doi:10.1021/acssynbio.7b00212

    DOI: 10.1021/acssynbio.7b00212

    No evidence for association with APOL1 kidney disease risk alleles and Human African Trypanosomiasis in two Ugandan populations (Journal article)

    Kimuda, M. P., Noyes, H., Mulindwa, J., Enyaru, J., Alibu, V. P., Sidibe, I., . . . TrypanoGEN Res. Grp., as members of The H3Africa C. (2017). No evidence for association with APOL1 kidney disease risk alleles and Human African Trypanosomiasis in two Ugandan populations. doi:10.1101/180679

    DOI: 10.1101/180679

    Novel Sampling Method for Assessing Human-Pathogen Interactions in the Natural Environment Using Boot Socks and Citizen Scientists, with Application to Campylobacter Seasonality (Journal article)

    Jones, N. R., Millman, C., van der Es, M., Hukelova, M., Forbes, K. J., Glover, C., . . . Consortium, E. N. I. G. M. A. (2017). Novel Sampling Method for Assessing Human-Pathogen Interactions in the Natural Environment Using Boot Socks and Citizen Scientists, with Application to Campylobacter Seasonality. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 83(14). doi:10.1128/AEM.00162-17

    DOI: 10.1128/AEM.00162-17

    SMRT Gate: A method for validation of synthetic constructs on Pacific Biosciences sequencing platforms (Journal article)

    D'Amore, R., Johnson, J., Haldenby, S., Hall, N., Hughes, M., Joynson, R., . . . Hall, A. (2017). SMRT Gate: A method for validation of synthetic constructs on Pacific Biosciences sequencing platforms. BIOTECHNIQUES, 63(1), 13-20. doi:10.2144/000114565

    DOI: 10.2144/000114565

    2016

    Companion: a web server for annotation and analysis of parasite genomes (Journal article)

    Steinbiss, S., Silva-Franco, F., Brunk, B., Foth, B., Hertz-Fowler, C., Berriman, M., & Otto, T. D. (2016). Companion: a web server for annotation and analysis of parasite genomes. NUCLEIC ACIDS RESEARCH, 44(W1), W29-W34. doi:10.1093/nar/gkw292

    DOI: 10.1093/nar/gkw292

    Current challenges of research on filamentous fungi in relation to human welfare and a sustainable bio-economy: a white paper. (Journal article)

    Meyer, V., Andersen, M. R., Brakhage, A. A., Braus, G. H., Caddick, M. X., Cairns, T. C., . . . Head, R. M. (2016). Current challenges of research on filamentous fungi in relation to human welfare and a sustainable bio-economy: a white paper.. Fungal biology and biotechnology, 3, 6. doi:10.1186/s40694-016-0024-8

    DOI: 10.1186/s40694-016-0024-8

    EuPathDB: the eukaryotic pathogen genomics database resource. (Journal article)

    Aurrecoechea, C., Barreto, A., Basenko, E. Y., Brestelli, J., Brunk, B. P., Cade, S., . . . Zheng, J. (2017). EuPathDB: the eukaryotic pathogen genomics database resource. NUCLEIC ACIDS RESEARCH, 45(D1), D581-D591. doi:10.1093/nar/gkw1105

    DOI: 10.1093/nar/gkw1105

    GeneMill: A 21st century platform for innovation (Journal article)

    Johnson, J. R., D'Amore, R., Thain, S. C., Craig, T., Mccue, H. V., Hertz-Fowler, C., . . . Hall, A. J. W. (2016). GeneMill: A 21st century platform for innovation. BIOCHEMICAL SOCIETY TRANSACTIONS, 44, 681-683. doi:10.1042/BST20160012

    DOI: 10.1042/BST20160012

    2015

    Enabling the genomic revolution in Africa (Journal article)

    Rotimi, C., & Consortium, H. (2014). Enabling the genomic revolution in Africa. SCIENCE, 344(6190), 1346-1348. doi:10.1126/science.1251546

    DOI: 10.1126/science.1251546

    Genome and Phylogenetic Analyses of Trypanosoma evansi Reveal Extensive Similarity to T. brucei and Multiple Independent Origins for Dyskinetoplasty (Journal article)

    Carnes, J., Anupama, A., Balmer, O., Jackson, A., Lewis, M., Brown, R., . . . Schnaufer, A. (2015). Genome and Phylogenetic Analyses of Trypanosoma evansi Reveal Extensive Similarity to T. brucei and Multiple Independent Origins for Dyskinetoplasty. PLOS NEGLECTED TROPICAL DISEASES, 9(1). doi:10.1371/journal.pntd.0003404

    DOI: 10.1371/journal.pntd.0003404

    Investigating the Influence of Ribavirin on Human Respiratory Syncytial Virus RNA Synthesis by Using a High-Resolution Transcriptome Sequencing Approach (Journal article)

    Aljabr, W., Touzelet, O., Pollakis, G., Wu, W., Munday, D. C., Hughes, M., . . . Hiscox, J. A. (2016). Investigating the Influence of Ribavirin on Human Respiratory Syncytial Virus RNA Synthesis by Using a High-Resolution Transcriptome Sequencing Approach. JOURNAL OF VIROLOGY, 90(10), 4876-4888. doi:10.1128/JVI.02349-15

    DOI: 10.1128/JVI.02349-15

    Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes (vol 5, 3979, 2014) (Journal article)

    Ilott, N. E., Heward, J. A., Roux, B., Tsitsiou, E., Fenwick, P. S., Lenzi, L., . . . Lindsay, M. A. (2015). Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes (vol 5, 3979, 2014). Nature Communications, 6. doi:10.1038/ncomms7814

    DOI: 10.1038/ncomms7814

    TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei (Journal article)

    Shameer, S., Logan-Klumpler, F. J., Vinson, F., Cottret, L., Merlet, B., Achcar, F., . . . Jourdan, F. (2015). TrypanoCyc: a community-led biochemical pathways database for Trypanosoma brucei. NUCLEIC ACIDS RESEARCH, 43(D1), D637-D644. doi:10.1093/nar/gku944

    DOI: 10.1093/nar/gku944

    2014

    Elucidating variations in the nucleotide sequence of Ebola virus associated with increasing pathogenicity (Journal article)

    Dowall, S. D., Matthews, D. A., Garcia-Dorival, I., Taylor, I., Kenny, J., Hertz-Fowler, C., . . . Hiscox, J. A. (2014). Elucidating variations in the nucleotide sequence of Ebola virus associated with increasing pathogenicity. GENOME BIOLOGY, 15(11). doi:10.1186/s13059-014-0540-x

    DOI: 10.1186/s13059-014-0540-x

    Elucidating variations in the nucleotide sequence of Ebola virus associated with increasing pathogenicity. (Journal article)

    Dowall, S. D., Matthews, D. A., Garcia-Dorival, I., Taylor, I., Kenny, J., Hertz-Fowler, C., . . . Hiscox, J. A. (2014). Elucidating variations in the nucleotide sequence of Ebola virus associated with increasing pathogenicity.. Genome biology, 15(11), 540. doi:10.1186/s13059-014-0540-x

    DOI: 10.1186/s13059-014-0540-x

    Genome Sequence of the Tsetse Fly (Glossina morsitans): Vector of African Trypanosomiasis (Journal article)

    Watanabe, J., Hattori, M., Berriman, M., Lehane, M. J., Hall, N., Solano, P., . . . IGGI. (2014). Genome Sequence of the Tsetse Fly (Glossina morsitans): Vector of African Trypanosomiasis. SCIENCE, 344(6182), 380-386. doi:10.1126/science.1249656

    DOI: 10.1126/science.1249656

    Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes (Journal article)

    Glover, L., Alsford, S., Baker, N., Turner, D. J., Sanchez-Flores, A., Hutchinson, S., . . . Horn, D. (2015). Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes. NATURE PROTOCOLS, 10(1), 106-133. doi:10.1038/nprot.2015.005

    DOI: 10.1038/nprot.2015.005

    Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes (Journal article)

    Iiott, N. E., Heward, J. A., Roux, B., Tsitsiou, E., Fenwick, P. S., Lenzi, L., . . . Lindsay, M. A. (2014). Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes. NATURE COMMUNICATIONS, 5. doi:10.1038/ncomms4979

    DOI: 10.1038/ncomms4979

    Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes (Journal article)

    Ilott, N. E., Heward, J. A., Roux, B., Tsitsiou, E., Fenwick, P. S., Lenzi, L., . . . Lindsay, M. A. (2014). Long non-coding RNAs and enhancer RNAs regulate the lipopolysaccharide-induced inflammatory response in human monocytes. Nature Communications, 5(1). doi:10.1038/ncomms4979

    DOI: 10.1038/ncomms4979

    2013

    A Cell-surface Phylome for African Trypanosomes (Journal article)

    Jackson, A. P., Allison, H. C., Barry, J. D., Field, M. C., Hertz-Fowler, C., & Berriman, M. (2013). A Cell-surface Phylome for African Trypanosomes. PLOS NEGLECTED TROPICAL DISEASES, 7(3). doi:10.1371/journal.pntd.0002121

    DOI: 10.1371/journal.pntd.0002121

    2012

    Antigenic diversity is generated by distinct evolutionary mechanisms in African trypanosome species (Journal article)

    Jackson, A. P., Berry, A., Aslett, M., Allison, H. C., Burton, P., Vavrova-Anderson, J., . . . Berriman, M. (2012). Antigenic diversity is generated by distinct evolutionary mechanisms in African trypanosome species. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 109(9), 3416-3421. doi:10.1073/pnas.1117313109

    DOI: 10.1073/pnas.1117313109

    Expression of chemosensory proteins in the tsetse fly Glossina morsitans morsitans is related to female host-seeking behaviour (Journal article)

    Liu, R., He, X., Lehane, S., Lehane, M., Hertz-Fowler, C., Berriman, M., . . . Zhou, J. -J. (2012). Expression of chemosensory proteins in the tsetse fly Glossina morsitans morsitans is related to female host-seeking behaviour. INSECT MOLECULAR BIOLOGY, 21(1), 41-48. doi:10.1111/j.1365-2583.2011.01114.x

    DOI: 10.1111/j.1365-2583.2011.01114.x

    GeneDB-an annotation database for pathogens (Journal article)

    Logan-Klumpler, F. J., De Silva, N., Boehme, U., Rogers, M. B., Velarde, G., McQuillan, J. A., . . . Berriman, M. (2012). GeneDB-an annotation database for pathogens. NUCLEIC ACIDS RESEARCH, 40(D1), D98-D108. doi:10.1093/nar/gkr1032

    DOI: 10.1093/nar/gkr1032

    2011

    Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania (Journal article)

    Rogers, M. B., Hilley, J. D., Dickens, N. J., Wilkes, J., Bates, P. A., Depledge, D. P., . . . Mottram, J. C. (2011). Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. GENOME RESEARCH, 21(12), 2129-2142. doi:10.1101/gr.122945.111

    DOI: 10.1101/gr.122945.111

    Differential protein expression throughout the life cycle of Trypanosoma congolense, a major parasite of cattle in Africa (Journal article)

    Eyford, B. A., Sakurai, T., Smith, D., Loveless, B., Hertz-Fowler, C., Donelson, J. E., . . . Pearson, T. W. (2011). Differential protein expression throughout the life cycle of Trypanosoma congolense, a major parasite of cattle in Africa. MOLECULAR AND BIOCHEMICAL PARASITOLOGY, 177(2), 116-125. doi:10.1016/j.molbiopara.2011.02.009

    DOI: 10.1016/j.molbiopara.2011.02.009

    High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome (Journal article)

    Alsford, S., Turner, D. J., Obado, S. O., Sanchez-Flores, A., Glover, L., Berriman, M., . . . Horn, D. (2011). High-throughput phenotyping using parallel sequencing of RNA interference targets in the African trypanosome. GENOME RESEARCH, 21(6), 915-924. doi:10.1101/gr.115089.110

    DOI: 10.1101/gr.115089.110

    TSIDER1, a short and non-autonomous Salivarian trypanosome-specific retroposon related to the ingi6 subclade (Journal article)

    Bringaud, F., Berriman, M., & Hertz-Fowler, C. (2011). TSIDER1, a short and non-autonomous Salivarian trypanosome-specific retroposon related to the ingi6 subclade. MOLECULAR AND BIOCHEMICAL PARASITOLOGY, 179(1), 30-36. doi:10.1016/j.molbiopara.2011.05.007

    DOI: 10.1016/j.molbiopara.2011.05.007

    Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance (Journal article)

    Downing, T., Imamura, H., Decuypere, S., Clark, T. G., Coombs, G. H., Cotton, J. A., . . . Berriman, M. (2011). Whole genome sequencing of multiple Leishmania donovani clinical isolates provides insights into population structure and mechanisms of drug resistance. GENOME RESEARCH, 21(12), 2143-2156. doi:10.1101/gr.123430.111

    DOI: 10.1101/gr.123430.111

    2010

    Characterisations of odorant-binding proteins in the tsetse fly Glossina morsitans morsitans (Journal article)

    Liu, R., Lehane, S., He, X., Lehane, M., Hertz-Fowler, C., Berriman, M., . . . Zhou, J. -J. (2010). Characterisations of odorant-binding proteins in the tsetse fly Glossina morsitans morsitans. CELLULAR AND MOLECULAR LIFE SCIENCES, 67(6), 919-929. doi:10.1007/s00018-009-0221-1

    DOI: 10.1007/s00018-009-0221-1

    Identification of Attractive Drug Targets in Neglected-Disease Pathogens Using an In Silico Approach (Journal article)

    Crowther, G. J., Shanmugam, D., Carmona, S. J., Doyle, M. A., Hertz-Fowler, C., Berriman, M., . . . Agueero, F. (2010). Identification of Attractive Drug Targets in Neglected-Disease Pathogens Using an In Silico Approach. PLOS NEGLECTED TROPICAL DISEASES, 4(8). doi:10.1371/journal.pntd.0000804

    DOI: 10.1371/journal.pntd.0000804

    Multiple genetic mechanisms lead to loss of functional TbAT1 expression in drug-resistant trypanosomes. (Journal article)

    Stewart, M. L., Burchmore, R. J. S., Clucas, C., Hertz-Fowler, C., Brooks, K., Tait, A., . . . Barrett, M. P. (2010). Multiple genetic mechanisms lead to loss of functional TbAT1 expression in drug-resistant trypanosomes.. Eukaryotic cell, 9(2), 336-343. doi:10.1128/EC.00200-09

    DOI: 10.1128/EC.00200-09

    Plant killers on the spot (Journal article)

    Pain, A., & Hertz-Fowler, C. (2010). Plant killers on the spot. NATURE REVIEWS MICROBIOLOGY, 8(9), 615. doi:10.1038/nrmicro2433

    DOI: 10.1038/nrmicro2433

    The Genome Sequence of Trypanosoma brucei gambiense, Causative Agent of Chronic Human African Trypanosomiasis (Journal article)

    Jackson, A. P., Sanders, M., Berry, A., McQuillan, J., Aslett, M. A., Quail, M. A., . . . Hertz-Fowler, C. (2010). The Genome Sequence of Trypanosoma brucei gambiense, Causative Agent of Chronic Human African Trypanosomiasis. PLOS NEGLECTED TROPICAL DISEASES, 4(4). doi:10.1371/journal.pntd.0000658

    DOI: 10.1371/journal.pntd.0000658

    2009

    Analysis of expressed sequence tags from the four main developmental stages of Trypanosoma congolense (Journal article)

    Helm, J. R., Hertz-Fowler, C., Aslett, M., Berriman, M., Sanders, M., Quail, M. A., . . . Donelson, J. E. (2009). Analysis of expressed sequence tags from the four main developmental stages of Trypanosoma congolense. MOLECULAR AND BIOCHEMICAL PARASITOLOGY, 168(1), 34-42. doi:10.1016/j.molbiopara.2009.06.004

    DOI: 10.1016/j.molbiopara.2009.06.004

    Discovery of Mating in the Major African Livestock Pathogen Trypanosoma congolense (Journal article)

    Morrison, L. J., Tweedie, A., Black, A., Pinchbeck, G. L., Christley, R. M., Schoenefeld, A., . . . Tait, A. (2009). Discovery of Mating in the Major African Livestock Pathogen Trypanosoma congolense. PLOS ONE, 4(5). doi:10.1371/journal.pone.0005564

    DOI: 10.1371/journal.pone.0005564

    Plasmodium genomics: latest milestone (Journal article)

    Pain, A., & Hertz-Fowler, C. (2009). Plasmodium genomics: latest milestone. NATURE REVIEWS MICROBIOLOGY, 7(3), 180-181. doi:10.1038/nrmicro2096

    DOI: 10.1038/nrmicro2096

    The genome of the blood fluke Schistosoma mansoni (Journal article)

    Berriman, M., Haas, B. J., LoVerde, P. T., Wilson, R. A., Dillon, G. P., Cerqueira, G. C., . . . El-Sayed, N. M. (2009). The genome of the blood fluke Schistosoma mansoni. NATURE, 460(7253), 352-U65. doi:10.1038/nature08160

    DOI: 10.1038/nature08160

    TriTrypDB: a functional genomic resource for the Trypanosomatidae (Journal article)

    Aslett, M., Aurrecoechea, C., Berriman, M., Brestelli, J., Brunk, B. P., Carrington, M., . . . Wang, H. (2010). TriTrypDB: a functional genomic resource for the Trypanosomatidae. NUCLEIC ACIDS RESEARCH, 38, D457-D462. doi:10.1093/nar/gkp851

    DOI: 10.1093/nar/gkp851

    Trypanosomatid Genomes Contain Several Subfamilies of ingi-Related Retroposons (Journal article)

    Bringaud, F., Berriman, M., & Hertz-Fowler, C. (2009). Trypanosomatid Genomes Contain Several Subfamilies of ingi-Related Retroposons. EUKARYOTIC CELL, 8(10), 1532-1542. doi:10.1128/EC.00183-09

    DOI: 10.1128/EC.00183-09

    Unity in diversity: lessons from Candida (Journal article)

    Hertz-Fowler, C., & Pain, A. (2009). Unity in diversity: lessons from Candida. NATURE REVIEWS MICROBIOLOGY, 7(11), 763. doi:10.1038/nrmicro2253

    DOI: 10.1038/nrmicro2253

    2008

    Genomic adaptation: a fungal perspective (Journal article)

    Pain, A., & Hertz-Fowler, C. (2008). Genomic adaptation: a fungal perspective. NATURE REVIEWS MICROBIOLOGY, 6(8), 572-573. doi:10.1038/nrmicro1964

    DOI: 10.1038/nrmicro1964

    Genomic-scale prioritization of drug targets: the TDR Targets database (Journal article)

    Agueero, F., Al-Lazikani, B., Aslett, M., Berriman, M., Buckner, F. S., Campbell, R. K., . . . Verlinde, C. L. M. J. (2008). Genomic-scale prioritization of drug targets: the TDR Targets database. NATURE REVIEWS DRUG DISCOVERY, 7(11), 900-907. doi:10.1038/nrd2684

    DOI: 10.1038/nrd2684

    Sequence data swell for nematodes (Journal article)

    Hertz-Fowler, C., & Pain, A. (2008). Sequence data swell for nematodes. NATURE REVIEWS MICROBIOLOGY, 6(11), 800-801. doi:10.1038/nrmicro2021

    DOI: 10.1038/nrmicro2021

    Telomeric Expression Sites Are Highly Conserved in Trypanosoma brucei (Journal article)

    Hertz-Fowler, C., Figueiredo, L. M., Quail, M. A., Becker, M., Jackson, A., Bason, N., . . . Berriman, M. (2008). Telomeric Expression Sites Are Highly Conserved in Trypanosoma brucei. PLOS ONE, 3(10). doi:10.1371/journal.pone.0003527

    DOI: 10.1371/journal.pone.0003527

    The minimum information about a genome sequence (MIGS) specification (Journal article)

    Field, D., Garrity, G., Gray, T., Morrison, N., Selengut, J., Sterk, P., . . . Wipat, A. (2008). The minimum information about a genome sequence (MIGS) specification. NATURE BIOTECHNOLOGY, 26(5), 541-547. doi:10.1038/nbt1360

    DOI: 10.1038/nbt1360

    2007

    Specialist fungi, versatile genomes. (Journal article)

    Hertz-Fowler, C., & Pain, A. (2007). Specialist fungi, versatile genomes.. Nature reviews. Microbiology, 5(5), 332-333. doi:10.1038/nrmicro1669

    DOI: 10.1038/nrmicro1669

    2005

    A feast of protozoan genomes (Journal article)

    Hertz-Fowler, C., Berriman, M., & Pain, A. (2005). A feast of protozoan genomes. NATURE REVIEWS MICROBIOLOGY, 3(9), 670-671. doi:10.1038/nrmicro1237

    DOI: 10.1038/nrmicro1237

    Comparative genomics of trypanosomatid parasitic protozoa (Journal article)

    El-Sayed, N. M., Myler, P. J., Blandin, G., Berriman, M., Crabtree, J., Aggarwal, G., . . . Hall, N. (2005). Comparative genomics of trypanosomatid parasitic protozoa. SCIENCE, 309(5733), 404-409. doi:10.1126/science.1112181

    DOI: 10.1126/science.1112181

    Integration of tools and resources for display and analysis of genomic data for protozoan parasites (Journal article)

    Aslett, M., Mooney, P., Adlem, E., Berriman, M., Berry, A., Hertz-Fowler, C., . . . Tivey, A. (2005). Integration of tools and resources for display and analysis of genomic data for protozoan parasites. INTERNATIONAL JOURNAL FOR PARASITOLOGY, 35(5), 481-493. doi:10.1016/j.ijpara.2005.01.011

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    The genome of the African trypanosome Trypanosoma brucei (Journal article)

    Berriman, M., Ghedin, E., Hertz-Fowler, C., Blandin, G., Renauld, H., Bartholomeu, D. C., . . . El-Sayed, N. M. (2005). The genome of the African trypanosome Trypanosoma brucei. SCIENCE, 309(5733), 416-422. doi:10.1126/science.1112642

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    The genome of the kinetoplastid parasite, Leishmania major (Journal article)

    Ivens, A. C., Peacock, C. S., Worthey, E. A., Murphy, L., Aggarwal, G., Berriman, M., . . . Myler, P. J. (2005). The genome of the kinetoplastid parasite, Leishmania major. SCIENCE, 309(5733), 436-442. doi:10.1126/science.1112680

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    What the genome sequence is revealing about trypanosome antigenic variation. (Journal article)

    Barry, J. D., Marcello, L., Morrison, L. J., Read, A. F., Lythgoe, K., Jones, N., . . . Berriman, M. (2005). What the genome sequence is revealing about trypanosome antigenic variation.. Biochemical Society transactions, 33(Pt 5), 986-989. doi:10.1042/bst20050986

    DOI: 10.1042/bst20050986

    2004

    Continuing tsetse and Trypanosoma genome sequencing projects (Journal article)

    Hertz-Fowler, C., & Berriman, M. (2004). Continuing tsetse and Trypanosoma genome sequencing projects. TRENDS IN PARASITOLOGY, 20(7), 308-309. doi:10.1016/j.pt.2004.04.013

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    GeneDB: a resource for prokaryotic and eukaryotic organisms (Journal article)

    Hertz-Fowler, C., Peacock, C. S., Wood, V., Aslett, M., Kerhornou, A., Mooney, P., . . . Barrell, B. (2004). GeneDB: a resource for prokaryotic and eukaryotic organisms. NUCLEIC ACIDS RESEARCH, 32, D339-D343. doi:10.1093/nar/gkh007

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    GeneDB: a resource for prokaryotic and eukaryotic organisms. (Journal article)

    Hertz-Fowler, C., Peacock, C. S., Wood, V., Aslett, M., Kerhornou, A., Mooney, P., . . . Barrell, B. (2004). GeneDB: a resource for prokaryotic and eukaryotic organisms.. Nucleic acids research, 32(Database issue), D339-D343. doi:10.1093/nar/gkh007

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    Parasite genome databases and web-based resources. (Journal article)

    Hertz-Fowler, C., & Hall, N. (2004). Parasite genome databases and web-based resources.. Methods in molecular biology (Clifton, N.J.), 270, 45-74. doi:10.1385/1-59259-793-9:045

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    2003

    The DNA sequence of chromosome I of an African trypanosome: gene content, chromosome organisation, recombination and polymorphism (Journal article)

    Hall, N., Berriman, M., Lennard, N. J., Harris, B. R., Hertz-Fowler, C., Bart-Delabesse, E. N., . . . Melville, S. E. (2003). The DNA sequence of chromosome I of an African trypanosome: gene content, chromosome organisation, recombination and polymorphism. NUCLEIC ACIDS RESEARCH, 31(16), 4864-4873. doi:10.1093/nar/gkg674

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    2002

    Introducing GeneDB: a generic database (Journal article)

    Hertz-Fowler, C., & Peacock, C. S. (2002). Introducing GeneDB: a generic database. Trends in Parasitology, 18(10), 465-467. doi:10.1016/S1471-4922(02)02361-9

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    2001

    CAP5.5, a life-cycle-regulated, cytoskeleton-associated protein is a member of a novel family of calpain-related proteins in Trypanosoma brucei. (Journal article)

    Hertz-Fowler, C., Ersfeld, K., & Gull, K. (2001). CAP5.5, a life-cycle-regulated, cytoskeleton-associated protein is a member of a novel family of calpain-related proteins in Trypanosoma brucei.. Molecular and biochemical parasitology, 116(1), 25-34. doi:10.1016/s0166-6851(01)00296-1

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    Erratum to “CAP5.5, a life-cycle-regulated, cytoskeleton-associated protein is a member of a novel family of calpain-related proteins in Trypanosoma brucei” (Journal article)

    Hertz-Fowler, C., Ersfeld, K., & Gull, K. (2001). Erratum to “CAP5.5, a life-cycle-regulated, cytoskeleton-associated protein is a member of a novel family of calpain-related proteins in Trypanosoma brucei”. Molecular and Biochemical Parasitology, 117(1), 119. doi:10.1016/S0166-6851(01)00347-4

    DOI: 10.1016/S0166-6851(01)00347-4

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