2021
Pyne, A. L. B., Noy, A., Main, K. H. S., Velasco-Berrelleza, V., Piperakis, M. M., Mitchenall, L. A., . . . Harris, S. A. (2021). Base-pair resolution analysis of the effect of supercoiling on DNA flexibility and major groove recognition by triplex-forming oligonucleotides. NATURE COMMUNICATIONS, 12(1). doi:10.1038/s41467-021-21243-yDOI: 10.1038/s41467-021-21243-y
2016
Bates, A. D., & Maxwell, A. (2016). Topology simplification: Important biological phenomenon or evolutionary relic? Comment on "Disentangling DNA molecules" by Alexander Vologodskii. PHYSICS OF LIFE REVIEWS, 18, 144-146. doi:10.1016/j.plrev.2016.07.007DOI: 10.1016/j.plrev.2016.07.007
Alston, P. O., Hasan, E., Gu, Y., Voelkel, S., Bates, A., & Hatton, K. (2016). LIFEPAL – Peer Assisted Learning in the School of Life Sciences. In 14th Learning & Teaching Conference - 'Recognising and Sharing Teaching Excellence'. University of Liverpool, Liverpool, UK.
2015
Reflective research project assessment using PebblePad (Presentation material)
Vieira De Mello Rigden, L., Bates, A., & Alston, P. (2015). Reflective research project assessment using PebblePad. Edge Hill University, Ormskirk, Lancashire.
Reflective research project assessment using PebblePad (Presentation material)
Mello, L. V., Bates, A., & Alston, P. (2015). Reflective research project assessment using PebblePad. Edge Hill University, Ormskirk, Lancashire.
2014
Glycosylated yellow laccases of the basidiomycete Stropharia aeruginosa (Journal article)
Daroch, M., Houghton, C. A., Moore, J. K., Wilkinson, M. C., Carnell, A. J., Bates, A. D., & Iwanejko, L. A. (2014). Glycosylated yellow laccases of the basidiomycete Stropharia aeruginosa. Enzyme and Microbial Techenology, 58-59, 1-7. doi:10.1016/j.enzmictec.2014.02.003DOI: 10.1016/j.enzmictec.2014.02.003
2013
Topological aspects of DNA function and protein folding. (Journal article)
Stasiak, A., Bates, A. D., Buck, D. E., Harris, S. A., & Sumners, D. W. (2013). Topological aspects of DNA function and protein folding.. Biochemical Society transactions, 41(2), 491-493. doi:10.1042/bst20130006DOI: 10.1042/bst20130006
Small DNA circles as probes of DNA topology (Journal article)
Bates, A. D., Noy, A., Piperakis, M. M., Harris, S. A., & Maxwell, A. (2013). Small DNA circles as probes of DNA topology. Biochemical Society Transactions.
2012
Base-pairing preferences, physicochemical properties and mutational behaviour of the DNA lesion 8-nitroguanine † (Journal article)
Bhamra, I., Compagnone-Post, P., O’Neil, I. A., Iwanejko, L. A., Bates, A. D., & Cosstick, R. (2012). Base-pairing preferences, physicochemical properties and mutational behaviour of the DNA lesion 8-nitroguanine †. Nucleic Acids Research, 40(21), 11126-11138. doi:10.1093/nar/gks799DOI: 10.1093/nar/gks799
Kumar, R., Riley, J. E., Parry, D., Bates, A. D., & Nagaraja, V. (2012). Binding of two DNA molecules by type II topoisomerases for decatenation.. Nucleic acids research, 40(21), 10904-10915. doi:10.1093/nar/gks843DOI: 10.1093/nar/gks843
Instant Notes in Molecular Biology (Book)
McLennan, A. G., Bates, A. D., Turner, P. C., & White, M. R. H. (2012). Instant Notes in Molecular Biology. New York: Taylor and Francis.
2011
Bates, A. D., Berger, J. M., & Maxwell, A. (2011). The ancestral role of ATP hydrolysis in type II topoisomerases: prevention of DNA double-strand breaks.. Nucleic acids research, 39(15), 6327-6339. doi:10.1093/nar/gkr258DOI: 10.1093/nar/gkr258
2010
The role of ATP in the reactions of type II DNA topoisomerases. (Journal article)
Bates, A. D., & Maxwell, A. (2010). The role of ATP in the reactions of type II DNA topoisomerases.. Biochemical Society transactions, 38(2), 438-442. doi:10.1042/bst0380438DOI: 10.1042/bst0380438
2009
How do type II topoisomerases use ATP hydrolysis to simplify DNA topology beyond equilibrium? Investigating the relaxation reaction of nonsupercoiling type II topoisomerases. (Journal article)
Stuchinskaya, T., Mitchenall, L. A., Schoeffler, A. J., Corbett, K. D., Berger, J. M., Bates, A. D., & Maxwell, A. (2009). How do type II topoisomerases use ATP hydrolysis to simplify DNA topology beyond equilibrium? Investigating the relaxation reaction of nonsupercoiling type II topoisomerases.. Journal of molecular biology, 385(5), 1397-1408. doi:10.1016/j.jmb.2008.11.056DOI: 10.1016/j.jmb.2008.11.056
2007
Energy coupling in type II topoisomerases: why do they hydrolyze ATP? (Journal article)
Bates, A. D., & Maxwell, A. (2007). Energy coupling in type II topoisomerases: why do they hydrolyze ATP?. Biochemistry, 46(27), 7929-7941. doi:10.1021/bi700789gDOI: 10.1021/bi700789g
Enzymatic disassembly of DNA-gold nanostructures (Journal article)
Kanaras, A. G., Wang, Z., Brust, M., Cosstick, R., & Bates, A. D. (2007). Enzymatic disassembly of DNA-gold nanostructures. SMALL, 3(4), 590-594. doi:10.1002/smll.200600494DOI: 10.1002/smll.200600494
Site-specific ligation of DNA-modified gold nanoparticles activated by the restriction enzyme <i>Sty</i>I (Journal article)
Kanaras, A. G., Wang, Z., Hussain, I., Brust, M., Cosstick, R., & Bates, A. D. (2007). Site-specific ligation of DNA-modified gold nanoparticles activated by the restriction enzyme <i>Sty</i>I. SMALL, 3(1), 67-70. doi:10.1002/smll.200600464DOI: 10.1002/smll.200600464
2006
Gold nanoparticle wires made using RNA-based self-assembly (Journal article)
Cumming, D. R. S., Bates, A. D., Callen, B. P., Cooper, J. M., Cosstick, R., Geary, C., . . . Xu, C. (2006). Gold nanoparticle wires made using RNA-based self-assembly. Journal of Vacuum Science & Technology B: Microelectronics and Nanometer Structures Processing, Measurement, and Phenomena, 24(6), 3196-3199. doi:10.1116/1.2363404DOI: 10.1116/1.2363404
Variable-temperature measurements of the single-molecule conductance of double-stranded DNA (Journal article)
van Zalinge, H., Schiffrin, D. J., Bates, A. D., Starikov, E. B., Wenzel, W., & Nichols, R. J. (2006). Variable-temperature measurements of the single-molecule conductance of double-stranded DNA. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 45(33), 5499-5502. doi:10.1002/anie.200601263DOI: 10.1002/anie.200601263
DNA topoisomerases: single gyrase caught in the act. (Journal article)
Bates, A. D. (2006). DNA topoisomerases: single gyrase caught in the act.. Current biology : CB, 16(6), R204-R206. doi:10.1016/j.cub.2006.02.029DOI: 10.1016/j.cub.2006.02.029
Construction and characterization of a gold nanoparticle wire assembled using Mg2+-dependent RNA-RNA interactions. (Journal article)
Bates, A. D., Callen, B. P., Cooper, J. M., Cosstick, R., Geary, C., Glidle, A., . . . Cumming, D. R. S. (2006). Construction and characterization of a gold nanoparticle wire assembled using Mg2+-dependent RNA-RNA interactions.. Nano letters, 6(3), 445-448. doi:10.1021/nl052316gDOI: 10.1021/nl052316g
Single-molecule conductance measurements of single- and double-stranded DNA oligonucleoticles (Journal article)
van Zalinge, H., Schiffrin, D. J., Bates, A. D., Haiss, W., Ulstrup, J., & Nichols, R. J. (2006). Single-molecule conductance measurements of single- and double-stranded DNA oligonucleoticles. CHEMPHYSCHEM, 7(1), 94-98. doi:10.1002/cphc.200500413DOI: 10.1002/cphc.200500413
Variable-temperature measurements of the single-molecule conductance of double-stranded DNA (Journal article)
Van Zalinge, H., Schiffrin, D. J., Bates, A. D., Starikov, E. B., Wenzel, W., & Nichols, R. J. (2006). Variable-temperature measurements of the single-molecule conductance of double-stranded DNA. Angewandte Chemie - International Edition, 45(33), 5499-5502. doi:10.1002/anie.200601263DOI: 10.1002/anie.200601263
2005
Coupling ATP hydrolysis to DNA strand passage in type IIA DNA topoisomerases. (Journal article)
Maxwell, A., Costenaro, L., Mitelheiser, S., & Bates, A. D. (2005). Coupling ATP hydrolysis to DNA strand passage in type IIA DNA topoisomerases.. Biochemical Society transactions, 33(Pt 6), 1460-1464. doi:10.1042/bst0331460DOI: 10.1042/bst0331460
DNA Topology (Book)
Bates, A. D., & Maxwell, A. (2005). DNA Topology. Oxford: Oxford University Press.
2004
Enzymatic DNA processing on gold nanoparticles (Journal article)
Wang, Z. X., Kanaras, A. G., Bates, A. D., Cosstick, R., & Brust, M. (2004). Enzymatic DNA processing on gold nanoparticles. JOURNAL OF MATERIALS CHEMISTRY, 14(4), 578-580. doi:10.1039/b314328gDOI: 10.1039/b314328g
2003
Towards multistep nanostructure synthesis: Programmed enzymatic self-assembly of DNA/gold systems (Journal article)
Kanaras, A. G., Wang, Z. X., Bates, A. D., Cosstick, R., & Brust, M. (2003). Towards multistep nanostructure synthesis: Programmed enzymatic self-assembly of DNA/gold systems. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 42(2), 191-+. doi:10.1002/anie.200390075DOI: 10.1002/anie.200390075